Figure 8
From: Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila
The Su(Hw) binding site has a pronounced DNA flexibility profile. Higher stacking free energy values are associated with DNA flexibility [38]. Blue indicates the stacking free energy profile for 100 best matches to Suppressor of Hairy-wing (Su [Hw]) consensus based on Patser P value; black indicates the profile for 100 random sequences; and red indicates the profile for the 12 Su(Hw) sites in the gypsy element. A representative sequence is given at the top. The gray zone marks the region between the highly conserved G nucleotides at positions 5 and 17 in the new Su(Hw) binding consensus.