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Table 2 Comparison of C. jejuni, H. pylori, and E. coli protein interaction sets to an E. coli reference set containing 599 low-throughput literature-cited interactions*

From: A proteome-wide protein interaction map for Campylobacter jejuni

  Reference set interologs Overlap with reference set interologs Overlap (%) with total interactions detected for each study Fraction of proteins in each study with orthologs in the reference set
C. jejuni 147 28 (19%) 0.24 7.9%
C. jejuni (HC) 147 27 (18%) 0.95 8.5%
H. pylori 84 10 (12%) 0.70 7.9%
E. coli § 599 81 (14%) 1.32 11.2%
E. coli 599 49 (8%) 0.44 11.2%
  1. *The reference set was derived from DIP [28]. Interolog lists were generated separately for each organism based on BLASTP reciprocal best match determination of orthologs. H. pylori interactions were detected by Rain et al. [11]. §E. coli interactions were predicted from Butland et al. [1]. E. coli interactions were predicted from Arrifuzzaman et al. [6]. HC, high confidence set.