Observing metabolic functions at the genome scale

Table 5 Number of genes in each induced and repressed set

Stress condition	Number of genes in induced set (in BlastSets)	Number of genes in repressed set (in BlastSets)
Heat shock [32]	173	2
Acid [32]	32	6
Alkali [32]	73	10
Peroxide [32]	99	35
NaCl [32]	193	113
Sorbitol [32]	136	8
Heat shock [33]	114	0
Nitrogen depletion [33]	167	11
Stationary phase [33]	334	0
Hyperosmotic [33]	20	0
Peroxide [33]	60	0
Diauxic shift [33]	17	0
Menadione [33]	30	14
Dithiothreitol [33]	56	0
Hypoosmotic [33]	11	0
Diamide [33]	94	0
Variable temperature [33]	91	0
Amino acid starvation [33]	61	7
Alternative carbon [33]	0	0
Cadmium [34]	149	16
Ash [34]	390	713
Sodium n-dodecyl benzosulfonate [34]	36	2
Sodium lauryl sulfate [34]	53	2
Capsaicin [34]	10	0
Thiuram [34]	273	166
Zineb [34]	62	17
Maneb [34]	21	4
Tetrachloro-isophthalonitrile [34]	347	518
Pentachlorophenol [34]	181	31
Trichlorophenol [34]	27	10
Ethanol [34]	210	30
Pentanol [34]	285	182
Irradiation [34]	6	6
Octanol [34]	119	55
Pentane [34]	28	40

The number of genes identified by BlastSets in each stress condition from the three sets of microarray experiments.

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