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Table 2 Sequences used to replace wild-type sequence in shha and shhb ar-Cs to generate the specified reporter constructs

From: Functional diversification of sonic hedgehog paralog enhancers identified by phylogenomic reconstruction

Construct name

Wild-type sequence

Mutated/introduced sequence

0.8shha:gfp:z-shha-arCΔC1

TGCACCTGAGCAAATA

GTACAAGTCTACCCGT

0.8shha:gfp:z-shha-arCΔC2

GAAGTGTCCTTTTCCAAGAGT

TCCTGTAAGCCCAAGCTCTAC

0.8shha:gfp:z-shha-arCΔC3

AATGACAATGTCC

CCGTCACCGTGAA

0.8shha:gfp:z-shha-arCΔC4

CTTTATTGGTTTTTAATTAGA

AGGGCGGTTGGGGGCAGGCGG

0.8shha:gfp:z-shha-arC+C4m

CTTTATTGGTTTTTAATTAGA

CTTTATTGAGTTTTTTTAAATTAAGG

0.8shha:gfp:z-shhb-arCΔC1

TGCACCTGTGTAAACA

GTACAAGTCTACCCGT

0.8shha:gfp:z-shhb-arCΔC3

TTTAAATGACAATGTCT

GGCTCCGTCACCGTGAA

0.8shha:gfp:z-shhb-arC+C2

CAGGGAAAAGCACAGTCTGT

GAAGTGTCCTTTTCCAAGAGT

0.8shha:gfp:z-shhb-arC+C4

GACTTTGTGTAAATTCAGCAG

CTTTATTGGTTTTTAATTAGA

0.8shha:gfp:z-shhb arC+C2rnd

CAGGGAAAAGCACAGTCTGT

TCTCCAGGCTCAACCATGAGC

0.8shha:gfp:z-shhb-arC+C4rnd

GACTTTGTGTAAATTCAGCAG

AGAAAGCTCGCGCGACCATGA