Table 1 Significance values relating genomic properties to clusters defined by the TBP regulatory network*

Environmental stress

1

Induced during heat stress

2

Repressed during heat stress

Gene ontology ^§

3

RB genes^¶

4

RP genes^¶

5

Oxidative phosphorylation {GO:6119}

6

Amine metabolism {GO:9308}

7

Alcohol metabolism {GO:6066}

8

Energy derivation {GO:15980}

9

Sporulation {GO:30435}

10

Ty element transposition {GO:6319}

11

Proteolysis {GO:6508}

General properties

12

Lowly transcribed

13

Highly transcribed

14

Low mRNA levels

15

High mRNA levels

16

SAGA-dominated

17

TATA-containing

18

Low H3 K4Me2 in ORF

19

Low H3 K4Me2 in IGR

Positively regulated by

20

Spt3 (SAGA)

21

Mot1

22

Bur6 (NC2)

23

Bdf1 (TFIID)

24

Bdf2

25

TAF1 (TFIID)

Negatively regulated by

26

RP genes

27

Spt3 (SAGA)

28

Mot1

29

Bur6 (NC2)

30

Bdf1 (TFIID)

31

Hda1

32

Tup1 (SSN6-TUP1)

33

Set1 (COMPASS)