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Figure 5 | Genome Biology

Figure 5

From: Quantifying similarity between motifs

Figure 5

E value based retrieval rate. The figure plots the percentage of query motifs that successfully matched the correct JASPAR target as a function of the number of sites used to create the query motif. Here 'success' means that the top-ranked motif is the correct target and has an E value less than 0.01. ALLR, average log-likelihood ratio; ED, euclidean distance; FIET, Fisher-Irwin exact test; KLD, Kullback-Leibler divergence; PCC, Pearson correlation coefficient; PCST, Pearson χ2 test; SW, Sandelin-Wasserman function.

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