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Table 2 The 40 most abundant H. glycines transcripts

From: Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines

Contig

EST

Contig length

E-value*

Identity (%)

Description

HgAffx.13905.2

599

846

4.4e-36

89.3

emb|CAB88203.1| Putative cuticular collagen [Globodera pallida]

HgAffx.18740.1

351

1,386

3.5e-201

100

gb|AAN15196.1| Actin [Globodera rostochiensis]

HgAffx.13471.1

232

1,290

4.3e-190

98.6

gb|AAO49799.1| Arginine kinase [Heterodera glycines]

HgAffx.7395.1

91

1,538

2.8e-202

100

gb|AAT70232.1| unc-87 [H. glycines]

HgAffx.3699.1

86

695

1.4e-60

100

gb|AAO33474.1| Gland-specific protein g4g12 [H. glycines]

HgAffx.24400.1

81

756

  

Novel

HgAffx.22869.1

78

1,315

1.8e-177

82

sp|P49149| 60S ribosomal protein L3 [Toxocara canis]

HgAffx.13905.1

68

1,199

3.9e-25

43

emb|CAE70235.1| Hypothetical protein CBG16724 [Caenorhabditis briggsae]

HgAffx.11519.1

66

1,937

9.6e-24

75.3

ref|XP_453836.1| Unnamed protein product [Kluyveromyces lactis]

HgAffx.15767.1

64

1,242

3.0e-88

68.7

emb|CAC33829.1| Annexin 2 [G. pallida]

HgAffx.17330.1

61

486

  

Novel

HgAffx.13471.2

57

1,237

8.4e-128

82.3

gb|AAB38001.1| Hypothetical protein T01B11.4 [Caenorhabditis elegans]

HgAffx.20336.3

55

2,138

4.0e-66

45.1

dbj|BAB33421.1| Putative senescence-associated protein [Pisum sativum]

HgAffx.22036.1

54

1,087

2.8e-94

78.2

gb|AAF99870.1| Ribosomal small subunit protein 3 [C. elegans]

HgAffx.19294.1

53

672

4.2e-27

46.7

gb|AAK21484.1| Lipid binding protein 6 [C. elegans]

HgAffx.10986.1

51

1,311

4.5e-151

94.1

gb|AAC79129.1| Glyceraldehyde-3-phosphate-dehydrogenase [G. rostochiensis]

HgAffx.13471.3

48

2,514

  

Novel

HgAffx.20065.1

48

2,092

0

95.6

gb|AAG47839.1| Heatshock protein 70 [H. glycines]

HgAffx.16311.1

47

2,368

2.3e-37

26.3

sp|Q94637| Vitellogenin 6 precursor [Oscheius brevis]

HgAffx.22005.5

44

615

2.0e-20

57.4

gb|AAL78212.1| Putative gland cell secretory protein Hgg-25 [H. glycines]

HgAffx.22952.1

44

565

2.9e-53

79

gb|AAT92172.1| Ribosomal protein S14 [Ixodes pacificus]

HgAffx.20012.1

44

486

  

Novel

HgAffx.16586.1

39

481

  

Novel

HgAffx.24042.1

38

474

3.1e-47

90.5

emb|CAA90434.1| Hypothetical protein C09H10.2 [C. elegans]

HgAffx.24357.1

37

479

4.1e-24

66.2

emb|CAE71709.1| Hypothetical protein CBG18686 [C. briggsae]

HgAffx.20747.1

37

1,145

9.8e-88

72.4

gb|AAQ12016.1| Tropomyosin [H. glycines]

HgAffx.8887.1

36

788

5.9e-76

67.4

emb|CAE71139.1| Hypothetical protein CBG17994 [C. briggsae]

HgAffx.21332.1

36

2,325

0

91

gb|AAO14563.2| Heatshock protein 90 [H. glycines]

HgAffx.18233.1

35

913

5.5e-69

83.6

gb|AAL40718.1| Myosin regulatory light chain [Meloidogyne incognita]

HgAffx.23479.1

33

595

7.2e-39

73.1

gb|AAF08341.1| Peptidyl-prolyl cis-trans isomerase [Brugia malayi]

HgAffx.13457.1

33

783

4.6e-67

70.5

emb|CAE58579.1| Hypothetical protein CBG01745 [C. briggsae]

HgAffx.15145.1

33

2,162

4.5e-153

62.5

emb|CAA90444.1| Hypothetical protein F18H3.3a [C. elegans]

HgAffx.24295.1

33

1,043

4.7e-44

80.9

sp|P92504| Cytochrome c type-1 [Ascaris suum]

HgAffx.20336.1

32

1,225

3.2e-157

92.7

gb|AAC48326.1| Beta-1,4-endoglucanase-2 precursor [H. glycines]

HgAffx.14833.1

31

1,440

3.0e-84

74

emb|CAA51679.1| Ubiquitin [Lycopersicon esculentum]

HgAffx.19292.1

30

749

7.9e-52

64.5

emb|CAE70207.1| Hypothetical protein CBG16683 [C. briggsae]

HgAffx.10017.1

30

846

1.0e-38

89.1

emb|CAB88203.1| Putative cuticular collagen [G. pallida]

HgAffx.19634.1

29

782

6.8e-61

 

emb|CAE64949.1| Hypothetical protein CBG09780 [C. briggsae]

HgAffx.24169.1

29

623

  

Novel

HgAffx.22005.1

28

765

3.9e-114

90.7

gb|AAP30835.1| Putative gland protein G33E05 [H. glycines]

  1. *1e-20 threshold. Full-length sequence.