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Table 3 CRE sites present near a set of brain-related miRNAs in the human genome

From: Comparative sequence analysis reveals an intricate network among REST, CREBand miRNA in mediating neuronal gene expression

  Conserved CRE site* Conserved CRE half site
miRNA Position Distance (bp) Position Distance (bp)
mir-124a-1    chr8:9801040-9801044 -2648
mir-124a-2 chr8:65452347-65452354 -1913   
mir-124a-3 chr20:61279330-61279337 -968 chr20:61232305-61232309 -47992
    chr20:61276720-61276724 -3577
    chr20:61317969-61317973 37665
mir-9-1 chr1:153204718-153204725 -1423 chr1:153212345-153212349 -9051
mir-9-2 chr5:88007547-88007554 -9034 chr5:88016703-88016707 -18190
    chr5:87995510-87995514 3003
mir-9-3 chr15:87706692-87706699 -5565 chr15:87712302-87712306 50
  chr15:87711861-87711868 -391 chr15:87740065-87740069 27813
  chr15:87743860-87743867 31604 chr15:87757417-87757421 45165
    chr15:87757437-87757441 45185
mir-132/212 chr17:1901302-1901309 -1247 chr17:1922008-1922012 -21956
  chr17:1900538-1900545 -486 chr17:1921968-1921972 -21916
  chr17:1900522-1900529 -470 chr17:1913396-1913400 -13344
  chr17:1900084-1900091 -35   
mir-135a-2    chr12:96426695-96426699 -33363
mir-153-1 chr2:219999719-219999726 -15292 chr2:219969610-219969614 14817
  chr2:219939817-219939824 44611 chr2:219969479-219969483 14948
    chr2:219964362-219964366 20065
mir-29a/29b-1 chr7:130063683-130063690 -44859   
mir-29b-2    chr1:204385822-204385826 -21559
    chr1:204384854-204384858 -20591
mir-139    chr11:72021296-72021300 -17474
  1. *CRE (cAMP response element); site: TGACGTCA. CRE half site: TGACG; can bind to CREB with weaker affinity. Position is referenced on hg17. Only sites perfectly conserved in human, mouse, rat and dog are shown.