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Table 4 Genes that are differentially expressed in favorable vs. unfavorable neuroblastoma

From: Human fetal neuroblast and neuroblastoma transcriptome analysis confirms neuroblast origin and highlights neuroblastoma candidate genes

Favorable NB > unfavorable NB

NBGS

Favorable NB < unfavorable NB

NBGS

neuroblast < favorable NB

neuroblast < favorable NB, neuroblast < unfavorable NB

AKAP7

6q

-

FABP6

5q

-

ARL7

2q

-

NEFL

8p

-

ASPN

9q

-

NPY

7p

-

BCL2

18q

1

neuroblast < unfavorable NB

C2orf23

2p

-

ALK

2p

-

CALB1

8q

-

ASCL1

12q

1

CAMK2B

7p

2

BIRC5

17q

3

CD24

6q

-

C22orf18

22q

-

CDC42

1p

1

C3

19p

-

DDAH1

1p

-

CALCB

11p

-

DNAPTP6

2q

-

CCNB1

5q

1

EPB41L3

18p

1

CD74

5q

-

FAM70A

Xq

-

CRH

8q

-

KIFAP3

1q

1

CSPG3

19p

-

OPHN1

Xq

-

DNCI1

7q

-

PDLIM5

4q

-

DTL

1

1

PPAN

19p

-

F12

5q

-

PRKCB1

16p

1

GFRA2

8p

-

RGS7

1q

2

IGHG3

14q

-

RNF11

1p

-

IGHM

14q

-

ST6GALNAC5

1p

-

IGKC

2p

1

SV2C

5q

-

IGLC2

22q

-

neuroblast > favorable NB, neuroblast > unfavorable NB

LMO3

12p

1

CACNA2D3

3p

-

MGC27165

14q

-

DLK1

14q

2

MLF1IP

4q

1

HBG1

11p

-

MMP9

20q

1

HBG2

11p

-

MYCN

2p

9

neuroblast > unfavorable NB

NEFH

  

ALDH3A2

17p

1

ODC1

2p

3

DLC1

8p

-

OGDHL

10q

-

EYA1

8q

-

P2RX5

17p

-

GCH1

14q

1

PRAME

22q

1

HBA2

16p

-

RPS4Y1

Yp

1

KIAA0960

7p

1

SERPINF1

17p

-

PTPRD

9p

-

TNFRSF10B

8p

2

PTPRK

6q

-

TOP2A

17q

1

SLC18A1

8p

-

TWIST1

7p

1

TFAP2B

6p

-

TYMS

18p

-

TLN2

15q

1

XAGE1

Xp

-

   

neuroblast > favorable NB, neuroblast < unfavorable NB

   

IGLJ3

22q

1

   

neuroblast > favorable NB

   

RNU2

17q

-

   

neuroblast > favorable NB, neuroblast > unfavorable NB

   

LOC492304

11p

-

  1. Genes that are differentially expressed compared with neuroblasts among the differentially expressed genes in favorable neuroblastoma (NB) versus unfavorable neuroblastoma, with an indication of the number of neuroblastoma microarray studies in which these genes were found through NBGS analysis. NBGS, Neuroblastoma Gene Server.