Skip to main content

Table 5 Sum of the ranks of the exonic 4-mers at the donor and acceptor splice site of lost introns and simulated introns

From: Intron gain and loss in segmentally duplicated genes in rice

  Sum of the ranks
  Donor site Acceptor site
Lost introns* 6,737 6,410
Simulation average(std) 7,647 (253) 6,679 (337)
P value of lost introns 0.0007 >0.05
  1. *Sum of the ranks of the exonic 4-mers at the donor and acceptor splice site of the 34 lost introns. A total of 10,000 iterations were generated. In each iteration, a total of 34 ranks were randomly generated according to the frequencies obtained from all the exonic 4-mers at the exon-intron boundaries of 33,011 FLS introns. Standard deviation is listed in the parenthesis. The P value for the sums of the ranks of the donor and acceptor splice site.