Skip to main content

Table 2 C. elegans genes that contain X-box motifs in their promoters, are positively correlated with daf-19 in gene expression, and have reduced expression in daf-19(-) strains

From: Identification of ciliary and ciliopathy genes in Caenorhabditis elegansthrough comparative genomics

C. elegans gene Locus SAGE Microarray Human Human genomic coordinates (chromosome:start..end) Cytogenetic Description
C18H9.8 - 0.43 5 ENSP00000262247 9:26946410..27052802 9p21.2 Intraflagellar transport 74 homolog
C48B6.8 (bbs-9) 0.75 43.5 ENSP00000313122 7:32942414..33418920 7p14.3 Bardet-Biedl syndrome 9 protein
E04A4.6 - 0.97 81.7 ENSP00000265993 10:97413166..97443890 10q24.1 Hypothetical protein C10orf61
F20D12.3 bbs-2 0.89 6.8 ENSP00000245157 16:55075801..55111696 16q12.2 Bardet-Biedl syndrome 2 protein
F32A6.2 - 0.87 6 ENSP00000355372 12:109024940..109118751 12q24.11 Intraflagellar transport 81 homolog
F38G1.1 che-2 0.82 11 ENSP00000312778 3:161457490..161600022 3q25.33 Intraflagellar transport 80 homolog
R01H10.6 bbs-5 0.95 4.6 ENSP00000295240 2:170161500..170188671 2q31.1 Bardet-Biedl syndrome 5
T25F10.5 bbs-8 0.46 7.7 ENSP00000339486 14:88360731..88414084 14q32.11 Bardet-Biedl syndrome 8 protein
T28F3.6 Ifta-2 0.83 10.3 ENSP00000320359 7:100550084..100558512 7q22.1 RAB5-like protein
Y41G9A.1 osm-5 0.58 5.3 ENSP00000323580 13:20038585..20163314 13q12.11 Tg737/IFT88 protein
ZK418.3 - 0.46 12.2 ENSP00000335094 2:62639421..62645127 2p15 Transmembrane protein 17
  1. daf-19 gene expression was as ascertained by SAGE. Reduced expression in daf-19(-) strains was determined by microarray.