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Table 1 Number of genes' mRNA expression patterns from individual PointClouds in Release 1 for the series of developmental stage cohorts used in [20]

From: Three-dimensional morphology and gene expression in the Drosophilablastoderm at cellular resolution I: data acquisition pipeline

Wild type Stage cohort Total
  4d 5:0-3% 5:4-8% 5:9-25% 5:26-50% 5:51-75% 5:76-100%  
bcd 0 0 2 0 2 0 0 4
croc 1 2 2 3 7 4 7 26
D 0 0 1 3 0 0 0 4
Dfd 0 0 0 4 5 4 1 14
eve 22 83 89 89 116 103 82 584
fkh 0 4 6 8 7 2 6 33
ftz 22 65 72 60 42 73 58 392
gt 1 24 27 28 22 16 10 128
h 0 2 2 3 3 1 0 11
hb 9 20 18 9 8 7 14 85
hkb 0 15 11 7 14 12 3 62
kni 9 8 10 10 9 16 11 73
Kr 1 11 23 9 14 15 4 77
prd 6 17 13 9 10 10 7 72
rho 0 2 8 16 3 13 10 52
slp1 1 2 6 6 13 29 12 69
sna 11 13 4 10 6 17 21 82
tll 0 0 0 0 0 4 2 6
trn 0 4 0 0 2 3 0 9
tsh 0 0 0 3 0 1 4 8
twi 2 4 7 11 11 7 4 46
zen 3 12 5 4 8 3 4 39
Total 88 288 306 292 302 340 260 1,876
  1. Since each embryo was stained for two genes, the total given in each column is double the number of embryos in the release. The release contains some additional embryos for which the staging was ambiguous.