Table 1 The initial list of the interactions and proteins represented in each of the existing human protein interaction datasets with total interactions, unique self-interactions and unique non-self interactions
Dataset | Version | Total interactions (number of proteins) | Unique self (A-A) interactions (number of proteins) | Unique (A-B) interactions (number of proteins) |
|---|---|---|---|---|
Reactome | 08/03/04 | 12,497 (6,257) | 160 (160) | 12,336 (807) |
BIND | 08/03/04 | 6,212 (5,412) | 549 (549) | 5,663 (4,762) |
HPRD* | 04/12/04 | 12,013 (4,122) | 3,028 (3,028) | 6,054 (2,747) |
Orthology transfer (all) | 03/31/04 | 71,497 (6,257) | 373 (373) | 71,124 (6,228) |
Orthology transfer (core) | 03/31/04 | 11,488 (3,918) | 206 (206) | 11,282 (3,863) |