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Table 6 Numbers of 7-mers and 8-mers shared between the 400 highest scoring 7-mers and 8-mers, respectively, in each pair of phylogenetic groups considered

From: Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach

(a) 7-mers

    
 

Y

W

F

M

Y

-

64(p < 10-17)

45(p < 10-6)

43(p < 10-6)

W

 

-

103(p < 10-48)

43(p < 10-6)

F

  

-

43(p < 10-6)

M

   

-

(b) 8-mers

    
 

Y

W

F

M

Y

-

36(p < 10-19)

26(p < 10-11)

10(p = 0.025)

W

 

-

59(p < 10-45)

23(p < 10-8)

F

  

-

16(p < 10-4)

M

   

-

  1. The number of (a) 7-mers and (b) 8-mers shared between the 400 highest scoring 7-mers and 8-mers, respectively, in each pair of phylogenetic groups considered. Y, yeasts; W, worms; F, flies; M, mammals. p-values were calculated using the hypergeometric distribution, as described in Materials and Methods.
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Genome Biology

ISSN: 1474-760X

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