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Table 2 Number of significant spot neighborhoods across the spatial layout of the arrays analyzed

From: Model selection and efficiency testing for normalization of cDNA microarray data

Microarray No normalization Linear normalization Global lowess P-lowess S-lowess LIN OLIN OSLIN
SW 1 1,500 1,483 1,625 214 220 106 0 0
SW 2 808 831 1,068 218 113 67 0 0
SW 3 874 815 723 126 96 78 1 0
SW 4 741 757 846 76 43 49 0 0
Apo 1 1,173 1,196 1,276 913 491 755 100 1
Apo 2 521 518 801 176 74 221 3 0
Apo 3 562 576 706 334 79 258 0 0
Apo 4 770 771 1,058 177 14 176 2 0
Apo 5 670 648 844 357 222 381 5 0
Apo 6 432 432 1,003 129 106 296 10 0
Apo 7 516 526 1,258 186 88 194 17 0
Apo 8 850 833 1,202 684 342 458 61 9
Apo 9 1,596 1,621 1,780 1,105 644 798 21 5
Apo 10 707 711 896 261 108 279 3 0
Apo 11 504 484 1,306 166 87 258 11 0
Apo 12 1,313 1,323 1,144 425 288 370 12 17
Apo 13 1,357 1,368 1,155 653 394 568 41 0
Apo 14 862 1,005 987 273 108 272 82 0
Apo 15 733 743 1,004 588 241 502 97 0
Apo 16 942 985 1,347 786 333 470 47 0
  1. The level of significance was defined by FDR = 0.01. The spot neighborhood was defined by a window of 5 × 5 spots.