From: Transcriptional regulation of protein complexes in yeast
 | Annotated complex | ORFs | Coverage | Max sig | Discovered patterns |
---|---|---|---|---|---|
Permanent | 26S proteasome | 36 | 0.83 | 15.84 | 24 |
 |    19-22S regulator | 18 | 0.94 | 8.76 | 16 |
 |    20S proteasome | 15 | 0.87 | 5.76 | 13 |
 | Respiration chain complexes |  |  |  |  |
 |    Cytochrome bc1 complex | 9 | 0.67 | 1.13 | 4 |
 |    Cytochrome c oxidase | 8 | 0.88 | 1.51 | 2 |
 |    F0-F1 ATP synthase | 15 | 0.67 | 4.01 | 4 |
 | Cytoplasmic ribosomes | 138 | 0.68 | 19.49 | 151 |
 |    Cytoplasmic ribosomal large subunit | 81 | 0.70 | 11.67 | 77 |
 |    Cytoplasmic ribosomal small subunit | 57 | 0.79 | 8.97 | 63 |
 | Cytoplasmic translation elongation | 9 | 0.78 | 2.35 | 10 |
 | Cytoplasmic translation initiation | 27 | 0.19 | 6.31 | 5 |
 |    eIF3 | 7 | 0.43 | 1.24 | 2 |
 | Nucleosomal protein complex | 8 | 1.00 | 4.38 | 20 |
 | RNA polymerase III | 13 | 0.46 | 1.52 | 2 |
 | RNA polymerase II holoenzyme | 35 | 0.11 | 1.81 | 2 |
Transient | Microtubules | 32 | 0.16 | 1.45 | 5 |
 | Pyruvate dehydrogenase | 5 | 0.60 | 1.81 | 1 |
 | Replication complexes |  |  |  |  |
 |    Replication complex | 19 | 0.42 | 1.66 | 5 |
 | SAGA complex | 14 | 0.50 | 1 | 5 |
 | Spindle pole body | 32 | 0.13 | 2.93 | 8 |
 |    SPB components | 16 | 0.25 | 3.38 | 8 |
 | Tim22p complex | 5 | 0.40 | 1.99 | 1 |
Others | Cdc28p complexes | 10 | 0.60 | 2 | 5 |
 | H+transporting ATPase-vacuolar | 15 | 0.40 | 2.46 | 6 |
 | Nuclear splicing complexes-Spliceosome | 66 | 0.06 | 1.55 | 5 |
 | Other DNA repair complexes | 5 | 0.40 | 1.11 | 4 |
 | Replication complexes | 49 | 0.41 | 15.64 | 7 |
 |    Replication fork complexes | 30 | 0.57 | 13.28 | 12 |
 | Respiration chain complexes | 37 | 0.59 | 8.49 | 11 |
 | rRNA processing complexes | 18 | 0.22 | 1.72 | 2 |
 | t-SNAREs | 10 | 0.40 | 1.45 | 3 |