Table 4 Domain composition of the set of new predictions
Number of entries | ID | Description |
|---|---|---|
57 | PF00097 | Zinc finger, C3HC4 type (RING finger) |
43 | PF00069 | Protein kinase domain |
35 | PF00481 | Protein phosphatase 2C |
26 | PF00023 | Ankyrin repeat |
21 | PF00931 | NB-ARC domain |
20 | PF00646 | F-box domain |
18 | PF04782 | Protein of unknown function (DUF632) |
18 | PF04783 | Protein of unknown function (DUF630) |
16 | PF00036 | EF hand |
14 | PF00135 | Carboxylesterase |
14 | PF00487 | Fatty acid desaturase |
13 | PF00651 | BTB/POZ domain |
13 | PF05049 | Interferon-inducible GTPase (IIGP) |
13 | PF00233 | 3'5'-cyclic nucleotide phosphodiesterase |
12 | PF00443 | Ubiquitin carboxyl-terminal hydrolase |
12 | PF00085 | Thioredoxin |
11 | PF00001 | 7 transmembrane receptor (rhodopsin family) |
11 | PF00047 | Immunoglobulin domain |
9 | PF00622 | SPRY domain |
9 | PF00628 | PHD-finger |
9 | PF00096 | Zinc finger, C2H2 type |
8 | PF01459 | Eukaryotic porin |
8 | PF03011 | Plasmodium falciparum erythrocyte membrane protein (PFEMP) |
8 | PF00400 | WD domain, G-beta repeat |
8 | PF00595 | PDZ domain (Also known as DHR or GLGF) |
8 | PF00560 | Leucine rich repeat |
7 | PF00520 | Ion transport protein |
7 | PF01135 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) |
7 | PF00514 | Armadillo/beta-catenin-like repeat |
7 | PF00989 | PAS domain |
7 | PF00134 | Cyclin, amino-terminal domain |
7 | PF00169 | PH domain |
6 | PF00300 | Phosphoglycerate Phos Phosphoglycerate mutase family |
6 | PF01145 | SPFH domain / Band 7 family |
6 | PF01582 | TIR domain |
6 | PF02174 | PTB domain (IRS-1 type) |
6 | PF00462 | Glutaredoxin |
6 | PF03193 | Protein of unknown function, DUF258 |
6 | PF00515 | TPR domain |
6 | PF00240 | Ubiquitin family |
6 | PF01265 | Cytochrome c/c1 heme lyase |
6 | PF00702 | haloacid dehalogenase-like hydrolase |
6 | PF04641 | Protein of unknown function, DUF602 |
6 | PF00271 | Helicase conserved carboxy-terminal domain |
5 | PF00070 | Pyridine nucleotide-disulphide oxidoreductase |
5 | PF01417 | ENTH domain |
5 | PF00270 | DEAD/DEAH box helicase |
5 | PF02230 | Phospholipase/Carboxylesterase |
5 | PF00891 | O-methyltransferase |
5 | PF00046 | Homeobox domain |
5 | PF05003 | Protein of unknown function (DUF668) |
5 | PF00010 | Helix-loop-helix DNA-binding domain |
5 | PF00170 | bZIP transcription factor |
5 | PF00018 | SH3 domain |
5 | PF00255 | Glutathione peroxidase |
5 | PF00017 | SH2 domain |
5 | PF00089 | Trypsin |
5 | PF00153 | Mitochondrial carrier protein |