From: Variation in alternative splicing across human tissues
AS type /tissue (motif name) | Oligonucleotides | Occurrences | Consensus (% of exons containing) |
---|---|---|---|
SE/brain (BR1) | CUCCUG | 169 | CUCC (45.3) |
CUCC U | 323 | ||
CUCC C | 264 | ||
CUCC | 945 | ||
C CUCC C | 137 | CCUC (41.0) | |
CCUC C | 363 | ||
CCUC | 1021 | ||
GCCUC C | 136 | ||
GCCUC | 375 | ||
GCCUC A | 122 | ||
G GCCUC | 118 | ||
U GCCUC | 108 | ||
SE/brain (BR2) | GGGU U | 97 | GGGU (25.6) |
GGGU | 411 | ||
A GGGU | 116 | ||
SE/brain (BR3) | UGGG A | 324 | UGGG (47.2) |
UGGG | 948 | ||
C UGGG | 426 | ||
CC UGGG | 171 | ||
SE/brain (BR4) | GGGA UU | 58 | GGGA (45.5) |
GGGA U | 176 | ||
GGGA | 840 | ||
SE/brain (BR5) | CUCA | 925 | CUCA (46.5) |
CUCA C | 206 | ||
GC CUCA | 122 | ||
GG CUCA | 102 | ||
G CUCAC | 79 | ||
CUCA GC | 126 | ||
SE/brain (BR6) | UAGC | 269 | UAGC (18.0) |
UAGC U | 106 | ||
G UAGC | 96 | ||
G UAGC U | 51 | ||
AG UAGC | 47 | ||
UAGC UG | 54 | ||
SE/brain (BR7) | UAGG | 186 | UAGG (13.8) |
U UAGG | 63 | ||
U UAGG G | 24 | ||
SE/testis (TE1) | UAGG | 99 | UAGG (16.6) |
U UAGG | 33 | ||
Core A5E/liver (LI1) | AAAC | 42 | AAAC (53.3) |
A AAAC | 18 | ||
Core A5E/liver (LI2) | UAAA | 29 | UAAA (40.0) |
UAAA CC | 5 |