Table 1 Results of data filtering and profile inspection
From: Genome-wide analysis of mRNA lengths in Saccharomyces cerevisiae
Spot type | Number of spots on each array | Number of profiles after filtering (threshold 2.0) | Number of profiles matched to a gene |
|---|---|---|---|
ORF | 7,492 (6,398) | 6,031 (5,498) | 5,846 (5,304) |
Intergenic | 6,389 | 3,689 | 2,998 |
Intron | 157 (133) | 32 | 28 |
LTR | 141 | 37 | 6 |
Mitochondrial | 138 (71) | 40 (28) | 18 (12) |
snRNA/snoRNA | 44 | 3 | 2 |
tRNA | 42 | 3 | 0 |
Ty | 31 (28) | 12 | 12 |
rRNA | 23 (19) | 17 (14) | 17 (14) |
Centromeric | 16 | 1 | 0 |
Telomeric | 10 | 2 | 1 |
Total | 14,483 (13,291) | 9,867 (9,311) | 8,928 (8,377) |