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Table 1 Substitution rates versus Ka/Ks ratios in duplicate genes

From: Different evolutionary patterns between young duplicate genes in the human genome

 

Different amino-acid substitution rates*

Equal amino-acid substitution rate†

Total

Different Ka/Ks ratios‡

54

11

65

Equal Ka/Ks ratio§

91

94

185

Total

145

105

250

  1. A 2 × 2 chi-square test. χ2 = 12.78, df = 1, p < 0.001. The null hypothesis is that the number of pairs with different Ka/Ks ratios is independent of the number of pairs with different amino-acid substitution rates. The values are the observed number of pairs for each category; for example, there are 54 pairs with both different Ka/Ks ratios and different amino-acid substitution rates. The amino-acid substitution rates (or the Ka/Ks ratios) in the two duplicate genes are considered different only if the difference is statistically significant. *Gene pairs with different amino-acid substitution rates between the two duplicates. †Gene pairs with equal amino-acid substitution rates between the two duplicates. ‡Gene pairs with different Ka/Ks ratios between the two duplicates. §Gene pairs with equal Ka/Ks ratios between the two duplicates.