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Articles selected by Faculty of 1000: archaeal adaptation to cold; human chromosome 7 sequence; comparative protein-structure modeling; new algorithm for sequence alignment; expression profiling human mast cells

Genome Biology20034:338

https://doi.org/10.1186/gb-2003-4-9-338

  • Published:

Summary

A selection of evaluations from Faculty of 1000 covering genomic analysis of cold-adapted methanogenic archaea, the sequence of human chromosome 7, comparative protein-structure modeling, a new algorithm for multiple sequence alignment and expression profiling human mast cells.

Keywords

  • Sequence Alignment
  • Gene Expression Profile
  • Hide Markov Model
  • Multiple Sequence Alignment
  • Human Chromosome

Archaeal adaptation to cold

Mechanisms of thermal adaptation revealed from the genomes of the antarctic archaea Methanogenium frigidum and Methanococcoides burtonii . Saunders NF, Thomas T, Curmi PM, Mattick JS, Kuczek E, Slade R, Davis J, Franzmann PD, Boone D, Rusterholtz K, et al. Genome Res 2003, 13:1580-1588.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2003-4-9-338.asp#Saunders

Human chromosome 7 sequence

The DNA sequence of human chromosome 7. Hillier LW, Fulton RS, Waterston RH, Wilson RK and colleagues. Nature 2003, 424:157-164.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2003-4-9-338.asp#Hillier

Comparative protein-structure modeling

Comparative protein structure modeling by iterative alignment, model building and model assessment. John B, Sali A. Nucleic Acids Res 2003, 31:3982-3892.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2003-4-9-338.asp#John

New algorithm for sequence alignment

SATCHMO: sequence alignment and tree construction using hidden Markov models. Edgar RC, Sjölander K. Bioinformatics 2003, 19:1404-1411.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2003-4-9-338.asp#Edgar

Expression profiling human mast cells

Identification of specific gene expression profile in human mast cells via Toll-like receptor 4 and Fc{epsilon}RI. Okumura S, Kashiwakura JI, Tomita H, Matsumoto K, Nakajima T, Saito H, Okayama Y. Blood 2003, Jul 10.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2003-4-9-338.asp#Okumura

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