Table 4 Genes specifically induced during infection
From: Transcriptome analysis of Sinorhizobium melilotiduring symbiosis
Gene ID | Gene name | Description | Cultured bacteria | Symbiotic bacteria | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
M. truncatula | M. sativa | |||||||||||
V + O2 | TY | VμO2 weak limitation | VμO2 strong limitation | Luteolin | J6-1021 18 dai | J6-1021 8 dai | TE7-1021 | J6-bacA | Sitel-1021 | |||
SMa0034 | sma0034 | Protease | 1 | 1.3 | 1.2 | 1.2 | 1.5 | 1.7 | 4.6 (+) | 5.5 (+) | 4.6 (+) | 1.0 |
SMa2111 | sma2111 | Hypothetical protein hemolysin-type calcium-binding protein | 1 | 1.1 | 0.9 | 0.7 | 1.1 | 1.0 | 1.8 (+) | 2.1 (+) | 1.7 | 1.4 |
SMc04171 | smc04171 | Hemolysin-type calcium-binding | 1 | 0.9 | 1.1 | 0.7 | 1.0 | 0.9 | 2.2 (+) | 2.7 (+) | 3.4 (+) | 0.9 |
SMc02661 | smc02661 | Toxin secretion ATP-binding protein | 1 | 1.0 | 0.9 | 0.7 | 0.9 | 1.4 | 1.5 | 2.1 (+) | 2.9 (+) | 1.1 |
SMa1302 | avhB11 | Type IV secretion protein | 1 | 1.1 | 0.8 | 0.6 | 1.0 | 1.0 | 2.8 (+) | 2.0 (+) | 3.1 (+) | 1.7 |
SMa1306 | avhB9 | Type IV secretion protein | 1 | 1.0 | 0.8 | 0.5 | 0.8 | 1.1 | 1.4 (+) | 1.8 (+) | 1.8 (+) | 1.3 |
SMa1310 | avhB7 | Type IV secretion protein | 1 | 0.9 | 0.6 | ND | 0.5 | 1.2 | 1.2 | 2.4 (+) | 2.9 (+) | 1.2 |
SMa1591 | sma1591 | Adenylate cyclase | 1 | 1.1 | 1.1 | 0.7 | 1.0 | 1.5 | 2.6 (+) | 2.6 (+) | 2.2 (+) | 1.4 |
SMa0570 | cyaF4 | Adenylate cyclase | 1 | 0.8 | 1.1 | 0.7 | 0.9 | 1.5 | 2.8 (+) | 2.6 (+) | 3.4 (+) | 2.5 (+) |
SMc02176 | cyaD1 | Adenylate cyclase | 1 | 1.1 | 0.9 | 0.8 | 0.9 | 1.3 | 3.1 (+) | 3.7 (+) | 4.0 (+) | 1.3 |
SMc02560 | chvI | Transcriptional regulator | 1 | 0.6 | 0.9 | 0.6 | 0.9 | 1.1 | 2.1 (+) | 1.4 (+) | 1.5 | 0.7 |
SMc04446 | chvG exoS | Histidine kinase sensory transmembrane protein | 1 | 1.2 | 0.7 | 1.4 | 1.2 | 2.0 | 2.8 (+) | 1.4 | 3.2 (+) | 0.8 |
SMc00257 | ropB2 | Outer membrane protein | 1 | 1.0 | 1.1 | 1.0 | 0.9 | 1.5 | 1.3 | 2.4 (+) | 2.4 (+) | 1.2 |
SMc02597 | sodC | Superoxide dismutase | 1 | 1.1 | 1.1 | 0.8 | 1.0 | 0.5 | 2.2 (+) | 2.1 (+) | 2.7 (+) | 1.1 |
SMb20338 | smb20338 | Transmembrane efflux protein (paraquat resistance) | 1 | 0.9 | 0.7 | 0.5 | 1.0 | 1.4 | 2.6 (+) | 2.3 (+) | 1.4 | 1.5 |
SMc02156 | smc02156 | Hypothetical protein | 1 | 1.1 | 2.9 (+) | 1.7 (+) | 1.0 | 1.0 | 0.7 | 2.1 (+) | 1.6 (+) | 0.7 |