Table 1 Number of ESTs and keywords characterizing the tissue types
From: Positional clustering of differentially expressed genes on human chromosomes 20, 21 and 22
Tissues | Keywords | INF | DIZ | ADLT | |
|---|---|---|---|---|---|
Stem_cell | stem hematopoietic | - | - | 1,592 | |
Embryo | whole body trophoblast | 10,346 | |||
Placenta | placent | 110,502 | 43,395 | - | |
Bone | bone osteo ewings | - | 16,551 | 7,407 | |
Cartilage | cartilage | - | 5,017 | 5,224 | |
Ear | cochlea ear | 14,966 | |||
Eye | eye retina retino cornea ocular | 6,370 | 28,235 | 30,036 | |
Skin | skin keratinocyt melanoma melanocytic psoriasis derm | - | 93,511 | 10,457 | |
Cardio-vascular | Heart | myocardium valve heart cardiac | 20,979 | 8,263 | |
Vascular | artery vein aorta endotheli blood vascul hemopoietic venous venae huvec platelet | - | - | 39,737 | |
Head_neck | mouth tongue tonsil head oral cavity gingiva | 5,817 | 2,628 | 5,787 | |
Muscle_skeletal | skeletal rhabdomyosarcom | - | 5,442 | 40,819 | |
Soft_tissue | adipose peritoneum omentum synovium fibroblast connective synovial epithelioid fibrosarcoma liposarcoma | 3,721 | 4,182 | 5,692 | |
Endocrine | adrenal | adrenal | - | 16,620 | 10,483 |
thyroid | thyroid parathyroid | - | 4,294 | 5,125 | |
pineal | pineal pituitary | - | 12,155 | 17,458 | |
Exocrines_breast | breast mammary nipple areola | - | 31,204 | 22,379 | |
Respiratory | lung pleura trachea bronchi larynx pharynx nasal nasopharyn laryngal bronchi laryngeal olfact | 4,406 | 82,164 | 38,108 | |
Digestive | liver | liver hepato bile gallbladder | 90,480 | 38,103 | 43,846 |
saliv | salivary parotid paratid | - | 11,193 | - | |
pancreas | pancrea langerhans | - | 61,178 | 17,042 | |
stomach | stomach gastric gastro | - | 23,580 | - | |
esophagus | esophag buccal | - | 3,807 | - | |
bowel | bowel intestine appendix cecum colon duodenu ileum jejunum colit | - | 70,282 | 9,933 | |
Genitourinary | femal_ovary | ovary oviduct ovarian | - | 65,196 | 6,106 |
femal_uterus | uterus endometrium pregnant exocervical | - | 10,5749 | 985 | |
femal_others | cervix fallopian | - | 29,380 | - | |
testis | testis epididym seminal vesicle | - | 25,484 | 6,034 | |
prostate | prostate | - | 55,609 | 22,785 | |
Urinaire kidney | kidney wilms | 1,427 | 57,891 | 13,776 | |
Urinaire others | bladder ureter urethra | - | 20,736 | - | |
others | gonad genitourina wolffian germ germinal mesonephros Mullerian paramesonephros urogenital | - | 11,930 | 4,341 | |
Lymphoreticular | immuno | leukocyte monocyt macrophag t-cell lymph b-cell bone marrow leukemi leukaemia mononuclear myelo lymphoblastoid T-lymphoc B-lymphoc | - | 75,877 | 72,618 |
spleen | spleen | 93,645 | - | 4,460 | |
thymus | thymus | 4,680 | - | - | |
Central Nervous System | brain | brain amygdala medulla oblongata cerebrum cortex frontal occipital hippocampus cerebellum corpus callosum basal ganglia striatum globus pallidus putamen caudate substantia nigra subthalamic tectum prosencephalon diencephalon thalamus corpora mesencephalon mesencephali quadrigemina glioblastoma astrocyt neuron cranial dura mater | 108,992 | 99,576 | 61,843 |
dorsal root ganglion | dorsal root | - | - | 1,520 | |
Peripheric Nervous System | sympathetic nerve nervous spinal neuronal dendrit | - | 18,360 | 22,456 | |
Neural system | neuro | - | 26,463 | - | |
NO TISSU_Sp | 68 | 662 | 88,540 | ||