Table 2 Putative protein-coding genes identified in Pirellula marina

Metabolism and biosynthesis

   B8

BH001139

Transaldolase

4.00E-14

Mycobacterium tuberculosis (O06812)

B

   D10

BH001140

Flagellar biosynthesis protein FlhA

4.00E-05

Aquifex aeolicus (O67265)

B

   E9

BH001141

Orotate phosphoribosyltransferase

4.00E-07

Methanococcus jannaschii (Q58509)

A

   pl2-A7

BH001142

Glutamate synthase

5.00E-25

Bacillus subtilis (P39812)

B

   pl2-B11

BH001143

Uroporphyrin-III C-methyltransferase

1.00E-22

Bacillus subtilis (P42437)

B

   pl2-C9

BH001144

Glutamate-1-semialdehyde 2,1-aminomutase (GSA)

7.00E-14

Xanthomonas campestris (Q06741)

B

   pl2-D11

BH001145

Phosphoribosylamine-glycine ligase (GARS)

4.00E-21

Homo sapiens (P22102)

E

   pl2-E2

BH001146

Cytochrome c oxidase polypeptide I

4.00E-08

Squalus acanthias mitochondrion (Q9ZZ52)

E(m)

   pl2-F2

BH001147

1-Deoxy-D-xylulose 5-phosphate reductoisomerase

9.00E-44

Zymomonas mobilis (Q9X5F2)

B

   pl2-F9

BH001148

Putative sulfatase

1.00E-09

Escherichia coli (P31447)

B

   pl2-G7

BH001149

Glucosamine fructose-6-phosphate aminotransferase

6.00E-05

Pyrococcus horikoshii (O57981)

A

Transport

   A2

BH001150

Vitamin B12 receptor precursor

2.00E-20

Escherichia coli (P06129)

B

   C5

BH001151

ABCA protein

3.00E-14

Aeromonas salmonicida (Q07698)

B

   pl2-A3

BH001152

O antigen export system ATP-binding protein RfbB

1.00E-06

Klebsiella pneumoniae (Q48476)

B

Regulation and signal transduction

   C9

BH001154

Protein-glutamate methylesterase CheB

2.00E-08

Bacillus subtilis (Q05522)

B

   pl2-A11

BH001155

Sensor protein BarA

5.00E-10

Escherichia coli(P26607)

B

   pl2-G4

BH001156

Chemotaxis protein CheC

2.00E-05

Bacillus subtilis (P40403)

B

DNA replication/insertion

   C6

BH001157

DNA polymerase I (Pol I)

3.00E-37

Haemophilus influenzae (P43741)

B

   C8

BH001158

Transposase for insertion sequence element

1.00E-05

Lactococcus lactis subsp. lactis (P35878)

B

   G1

BH001159

ATP-dependent DNA helicase HUS2

4.00E-10

Schizosaccharomyces pombe (Q09811)

E

Translation

   B2

BH001160

Leucyl-tRNA synthetase (leucine tRNA ligase)

1.00E-25

Thermotoga maritima (Q9WY15)

B

   pl2-A10

BH001161

Alanyl tRNA synthetase

6.00E-14

Bacillus subtilis (O34526)

B

Miscellaneous

   F3

BH001162

Ribonuclease E (RNase E)

1.00E-38

Haemophilus influenzae (P44443)

B

   H6

BH001163

Inter-alpha-trypsin inhibitor heavy chain H2 precursor

2.00E-06

Mus musculus (Q61703)

E

   pl2-D4

BH001164

Putative methionine aminopeptidase B (MAP) peptidase M

3.00E-08

Rickettsia prowazekii (Q9ZCD3)

B

Hypothetical proteins

   A4

BH001153

Hypothetical transcriptional regulator HT1052

6.00E-05

Haemophilus influenzae (P45008)

B

   pl2-E10

BH001165

Hypothetical protein MJ1612

4.00E-15

Methanococcus jannaschii (Q59007)

A

   pl2-F11

BH001166

Hypothetical 25.5 kDa protein in HupB-COF intergenic region

2.00E-09

Escherichia coli (P77756)

B

   pl2-G10

BH001167

Hypothetical 17.3 kDa protein CY1A11.16C

1.00E-13

Mycobacterium tuberculosis (Q50606)

B