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Table 4 5' UTR sequences with experimentally proved IRES elements

From: Untranslated regions of mRNAs

UTRdb*

EMBL†

Gene description

UTRsite

Reference

5HSA004100

J04513

Human FGF-2

Y

[54]

5HSA007092

X87949

Human BiP

Y

[55]

5DVI000022

M95825

Drosophila Antennapedia

 

[56]

5HSA007484

M12783

Human PDGF2/c-sis

Y

[57]

5HSA011699

AF025841

Acute myeloid leukemia 1 protein (AML1)

Y

[58]

5HSA000138

AF013263

Apoptotic protease activating factor 1 (Apaf-1)

 

[59]

5HSA001903

AF006822

Myelin transcription factor 2 (MYT2)

 

[60]

5CGR000096

M17169

Chinese hamster glucose-regulated protein GRP78

Y

[30]

5BTA000471

M13440

Bovine basic fibroblast growth factor (FGF)

Y

[30]

5RNO001555

M22427

Rat basic fibroblast growth factor (FGF)

Y

[30]

5HSA015336

D14838

Human FGF-9

 

[30]

5HSA005291

M17446

Human Kaposi's sarcoma oncogene (fibroblast growth factor)

 

[30]

  1. The elements recognized by the IRES detection algorithm in UTRsite [47,48,50] are marked 'Y'. Accession numbers in the *UTRdb [47] and †EMBL databases [52].
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Genome Biology

ISSN: 1474-760X

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