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Table 1 Ordering of BACs sequences by blasting with long cDNAs to the human genome sequences (htgs)

From: Assembling and gap filling of unordered genome sequences through gene checking

cDNAs and Acc. No Length (bp) Exon sequences homologous to BACs sequences (bp) Acc. No., length (bp) and ordering of BACs (denoted by first as 1,Second as 2, and so on) Chromosome$
Sea Urchin β-DYNEIN 13799 (2143-9465) AC073102.1, 197994bp (1) 7
   (9228-12323) AAC004002.1, 112314bp (2)  
RERE protein (AB036737) 8035 (3-492) AC025240.3, 170048bp (1) 1
   (491-1467) AC021953.3, 169752bp (2)  
   (1158-1921) AL096855.26,177246bp (3)  
   (1834-8018) AC016049.2, 198254bp (4)  
KIAA0603 (NM_014832) 5922 (118-2380) AL139230.7, 217520bp (1) 13
   (842-5922) AC011164.4, 183577bp (2)  
   (1516-5922) AL162571.4, 184953bp (3)  
KIAA0570 (NM_014709) 5842 (64-3895) AC073568.1, 138091bp (1) 2
   (120-4205) AC016894.4, 164561bp (2)  
   (2576-5843) AC018889.2, 174186bp (3)  
KIAA0535 (NM_014682) 6183 (1-720) AC009995.4, 158883bp(1) 8
   (650-3047)* AC021915.1, 51198bp (2)  
   (3129-6183) AC023536.1, 50388bp (*4)  
RalGPS1A (NM_014636) 6336 (1-484)* AL160169.2, 145953bp(1) 9
   (565-875)* AL356862.2, 132794bp(*3)  
   (1015-6336) AL354705.3, 165901bp(*5)  
KIAA0294 (NM_014629) 8467 (1-5983) AF236876.2, 113733bp(1) 8
   (5206-8467) AF170801.2, 131032bp(2)  
(RATMIBP1)(D37951) 9731 (1-368)* AL355307.2, 206594bp(1) 6
   (615-9731) AL136122.3, 131255bp(*3)  
  1. Ordering of BACs sequences by blasting with long cDNAs to the human genome sequences (htgs). Exonic gaps and subsequently missing BACs are denoted by star (*). In cases of missing BACs sequences, orderings are denoted as (1),(2),(*4) instead of (1), (2), (3). $ Chromosome assignments are according to release of BAC sequences from genome centers.