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Table 7 Key to sequence identifiers

From: The emerging periplasm-localized subclass of AroQ chorismate mutases, exemplified by those from Salmonella typhimurium and Pseudomonas aeruginosa

Species name

Acronym

Gene name

GI number

Actinobacillus actinomycetemcomitans

Aac

AroQ•PheA

N/A

Actinobacillus actinomycetemcomitans

Aac

AroQ•TyrA

N/A

Aquifex aeolicus

Aae

AroQ•PheA

8134616

Aeropyrum penix

Ape

AroQ

N/A

Archaeoglobus fulgidus

Afu

TyrA•AroQ•PheA

11497843

Bacillus subtilis

Bsu

AroQ•AroA

728897

Bordetella pertussis

Bpe

AroQ•PheA

N/A

Campylobacterium jejeuni

Cje

AroQ•PheA

11270735

Chlorobium tepidum

Cte

AroQ

N/A

Clostridium acetobutylicum

Cac

AroQ•AroD

N/A

Clostridium difficile

Cdi

AroQ•PheA

N/A

Corynebacterium diphtheriae

Cdip

AroQ

N/A

Deinoccoccus radiodurans

Dra

AroQ•AroA

7473313

Enterococcus facaelis

Efa

AroQ

N/A

Erwinia herbicola

Ehe

AroQ•PheA

266771

Erwinia herbicola

Ehe

*AroQ

1168941

Escherichia coli

Eco

AroQ•PheA

130050

Escherichia coli

Eco

AroQ•TyrA

136592

Haemophilus influenzae

Hin

AroQ•PheA

1172476

Haemophilus influenzae

Hin

AroQ•TyrA

1174832

Helicobacter pylori

Hpy

AroQ

7464214

Klebsiella pneumoniae

Kpn

AroQ•PheA

N/A

Klebsiella pneumoniae

Kpn

AroQ•TyrA

N/A

Meloidogyne javanica

Mjav

*AroQ

5353514

Methanobacterium thermoautotrophicum

Mth

AroQ

2621894

Methanococcus jannaschii

Mjan

AroQ

2495875

Mycobacterium avium

Mav

AroQ

N/A

Mycobacterium avium

Mav

*AroQ

N/A

Mycobacterium bovis

Mbo

AroQ

N/A

Mycobacterium bovis

Mbo

*AroQ

N/A

Mycobacterium tuberculosis

Mtu

AroQ

1524214

Mycobacterium tuberculosis

Mtu

*AroQ

7476951

Neisseria gonorrhoeae

Ngo

AroQ•PheA

8134631

Neisseria meningitidis

Nme

AroQ•PheA

11270737

Pasteurella multocidans

Pmu

AroQ•PheA

12720367

Pasteurella multocidans

Pmu

AroQ•TyrA

12720942

Porphyromonas gingivalis

Pgi

AroA•AroQ

N/A

Pseudomonas aeruginosa

Pae

AroQ•PheA

11347571

Pseudomonas aeruginosa

Pae

PchB

2498748

Pseudomonas aeruginosa

Pae

*AroQ

11350384

Pseudomonas fluorescens

Pfl

PchB

1771427

Pseudomonas stutzeri

Pst

AroQ•PheA

5712091

Pyrococcus furiosus

Pfu

AroQ

N/A

Salmonella typhimurium

Sty

AroQ•PheA

N/A

Salmonella typhimurium

Sty

AroQ•TyrA

N/A

Salmonella typhimurium

Sty

*AroQ

N/A

Shewanella putrefaciens

Spu

AroQ•PheA•AroA

N/A

Shewanella putrefaciens

Spu

AroQ•TyrA

N/A

Sinorhizobium meliloti

Sme

AroQ

N/A

Sinorhizobium meliloti

Sme

PchB

N/A

Staphylococcus aureus

Sau

AroQ•AroA

13701532

Streptomyces coelicolor

Sco

PchB

5689912

Streptomyces coelicolor

Sco

AroQ

7320903

Streptococcus mutans

Smu

AroQ

N/A

Streptococcus pneumoniae

Spn

AroQ

N/A

Streptococcus pyogenes

Spy

AroQ

13621905

Streptomyces pristinaespiralis

Spr

PapB

1575338

Thermotoga maritima

Tma

AroQ•PheA

7437419

Thiobacillus ferrioxidans

Tfe

AroQ•PheA

N/A

Vibrio cholerae

Vch

AroQ•PheA

11270725

Vibrio cholerae

Vch

AroQ•TyrA

11270723

Vibrio vulnificans

Vvu

PchB

1657699

Xanthomonas campestris

Xca

AroQ•PheA

3153199

Yersinia pestis

Ype

AroQ•PheA

N/A

Yersinia pestis

Ype

AroQ•TyrA

N/A

Yersinia pestis

Ype

*AroQ

N/A

  1. aN/A refers to sequences obtained from contigs of unfinished genomes at NCBI or TIGR. FASTA files are available from the authors.