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Table 1 Databases of transcriptional regulatory regions derived from TRRD

From: Genome regulation in the (so-called) post-genomic era

Database

URL

TRANSFAC

http://transfac.gbf.de

PathoDB

No website yet available

TRRD

http://www.bionet.nsc.ru/trrd/

Databases derived from TRRD

 

   COMPEL

http://compel.bionet.nsc.ru/

   Cell-cycle-specific genes

http://wwwmgs.bionet.nsc.ru/mgs/papers/kel_ov/celcyc/

   Erythroid-specific genes

http://wwwmgs.bionet.nsc.ru/mgs/papers/podkolodnaya/esg-trrd/

   Steroidogenesis-controlling genes

http://wwwmgs.bionet.nsc.ru/mgs/papers/ignatieva/es-trrd/

   Plant genes

http://wwwmgs.bionet.nsc.ru/mgs/papers/goryachkovsky/plant-trrd/

   SELEX data

http://wwwmgs.bionet.nsc.ru/mgs/systems/Selex/

   Data from large-scale experiments on site activity

http://wwwmgs.bionet.nsc.ru/mgs/systems/activity/