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Table 1 Organization of the mouse Gcnf gene

From: Genomic structure of the gene for mouse germ cell nuclear factor (GCNF)

Exon

Exon

cDNA

5' splice donor

Intron

Intron

3' splice acceptor

number

size (bp)

position*

 

number

size (kbp)

 

1

>344

1-344

CCGCGCAACGgtgggta

1

ND

ctattgttctctctttagGTTTCT

2

42

345-386

CCAGGCACTAgtaagttc

2

>12

gttctttttgctttgcagATGGAG

3

45

387-431

CATATACCTGgtaagtgg

3

ND

tgacttatccatgtttagTTTCCG

4

243

432-674

AACAGGAAGGgtgagttg

4

>12

gtctacatttccttctagCTATCA

5

56

675-730

ACCAGTCCAGgtgagtcc

5

ND

atccatttcttgccaaagATATCA

6

155

731-885

TATCATCCAGgtgagcta

6

ND

tgaagtttttctctccagTAGGTC

7

228

886-1113

TTGAAGATGGgtgagtta

7

1.238

tcctgtccctgcccccagGTATGC

8

255

1114-1368

AACTCCACAGgtgagagc

8

ND

cctgtatctgttctccagATTTAG

9

122

1369-1490

CTGAATCAAGgtgagtag

9

1.408

ttttgtttttgttttcagATATCA

10

153

1491-1643

TACATCGCAGgtaatatt

10

1.567

tctcttccctttacctagGCAAGA

11

>869

1644

    
  1. Lower-case letters are used for the intron sequence and capital letters for the exon sequence. The GenBank accession numbers for the exons and the flanking sequences are AF254575S1-AF254575S8. *Relative to GenBank entry MMU09563.