Skip to main content

Table 1 Putative formin-related genes of Arabidopsis thaliana

From: Are plant formins integral membrane proteins?

   Protein      Number  
  Primary sequence ORF ORF    of  
Gene accession accession location* size Type Chr introns Notes
AtFORMIN1 gb|AC002062 gb|AAB61101 47 640...48 637; 760 Genomic I I AtORF2 in [6]
  (emb|T43335)   48 716...50 000   (EST)    
AtFORMIN2 gb|AC0022333 gb|AAB64026 28 161...26 738; 894 Genomic II 3 AtORF1 in [6]
  (gb|AI997606)   26 653...26 466;   (EST)    
    26 314...26 061;      
    25 979...25 161      
    (R)      
AtFORMIN3 emb|Z97338 gb|CAB10299 30 407... 30 285; 589 Genomic IV 6 Sequencing error at
    30 171... 29 688;      the 5' end leading to
    29 608... 29 146;      ORF truncation?
    29 075... 28 870;      
    28 800... 28 683;      
    28 602... 28 566;      
    28 485... 28 147      
    (R)      
AtFORMIN4 gb|AC002396 gb|AAC00575 28 830... 29 848; 825 Genomic I 3 ORF extends 15 base
  (gb|AI998115)   29 951... 30 296;   (EST)    pairs upstream of the
    30 542...31 218;      reported ATG;
    31 885... 31 320      alternative splicing
         possible
AtFORMIN5 dbj|AB016879   67 574... 67 401; 705 Genomic V 5 Alternative splicing
    66 710... 66 520;      possible
    66 171... 66 092;      
    66 004... 65 389;      
    65 298... 65 099;      
    64 637... 63 784;      
    (R)      
AtFORMIN6 dbj|AB013390   6 001... 7 470; 910 Genomic V 3  
  (emb|F19772)   7 550... 7 757;   (EST)    
    8 244... 8 506;      
    8 587... 9 378      
AtFORMIN7 gb|AC007258 gb|AAD39332 121 331... 120 011; 929 Genomic I I  
    122 896...121 428;(R)      
AtFORMIN8 dbj|AB025639   41 595... 39 722; 1051 Genomic III 3  
  (emb|Z181512)   39 635... 39 430;   (EST)    
    39 248... 39 004      
    38 919... 38 092      
    (R)      
  1. * ORF coordinates refer to the longest putative ORF in the first sequence (first primary accession) listed. (R), reverse complement. The OFR size is given in codons. Chr, chromosome number.