Table 2 Number and distribution of coding region SNPs in the resequenced sorghum genomes
From: Genome-wide patterns of genetic variation in sweet and grain sorghum (Sorghum bicolor)
| Â | Bona fidegenes | Low confidence genes | Transposons | Pseudogenes | Total | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample | Non-syn | Syn | Non-syn/ Syn | Non-syn | Syn | Non-syn/ Syn | Non-syn | Syn | Non-syn/ Syn | Non-syn | Syn | Non-syn/ Syn | Non-syn/Syn |
Ji2731 | 23,462 | 18,710 | 1.25 | 3,397 | 1,830 | 1.86 | 853 | 449 | 1.90 | 0 | 0 | 0.00 | 1.32 |
Keller | 14,091 | 10,346 | 1.36 | 2,048 | 1,016 | 2.02 | 606 | 330 | 1.84 | 214 | 164 | 1.30 | 1.43 |
E-Tian | 17,781 | 14,196 | 1.25 | 2,386 | 1,281 | 1.86 | 609 | 374 | 1.63 | 314 | 222 | 1.41 | 1.31 |
Total | 38,261 | 29,625 | 1.29 | 5,981 | 3,113 | 1.92 | 1,601 | 909 | 1.76 | 464 | 327 | 1.42 | 1.36 |