From: JBrowse 2: a modular genome browser with views of synteny and structural variation
Product name | Where to find it | Brief description |
---|---|---|
JBrowse Web | Static-site compatible app which can display multiple view types in the same session | |
JBrowse Desktop | Cross-platform desktop app with ability to save user sessions to disk, and display multiple view types in the same session | |
JBrowse CLI | @jbrowse/cli on NPM [12] | A command line tool used for administering JBrowse Web instances |
JBrowse Image CLI | @jbrowse/img on NPM | A command line tool for generating static images (SVG, PNG) of JBrowse sessions |
JBrowse Embedded Components | @jbrowse/react-linear-genome-view, @jbrowse/react-circular-genome-view on NPM | Libraries that web developers can use to display JBrowse views on their website |
JBrowseR [13] | JBrowseR on CRAN [14] | An R package using JBrowse Embedded components that can be used in the RStudio IDE or Shiny apps |
JBrowse Jupyter [15] | jbrowse-jupyter on PyPI [16] | A Python package for JBrowse Embedded components that can be used in Jupyter Notebooks |