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Table 1 JBrowse 2 consists of multiple products, aimed at different applications but sharing a common code base

From: JBrowse 2: a modular genome browser with views of synteny and structural variation

Product name

Where to find it

Brief description

JBrowse Web

https://jbrowse.org/jb2/download/

Static-site compatible app which can display multiple view types in the same session

JBrowse Desktop

https://jbrowse.org/jb2/download/

Cross-platform desktop app with ability to save user sessions to disk, and display multiple view types in the same session

JBrowse CLI

@jbrowse/cli on NPM [12]

A command line tool used for administering JBrowse Web instances

JBrowse Image CLI

@jbrowse/img on NPM

A command line tool for generating static images (SVG, PNG) of JBrowse sessions

JBrowse Embedded Components

@jbrowse/react-linear-genome-view, @jbrowse/react-circular-genome-view on NPM

Libraries that web developers can use to display JBrowse views on their website

JBrowseR [13]

JBrowseR on CRAN [14]

An R package using JBrowse Embedded components that can be used in the RStudio IDE or Shiny apps

JBrowse Jupyter [15]

jbrowse-jupyter on PyPI [16]

A Python package for JBrowse Embedded components that can be used in Jupyter Notebooks