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Fig. 4 | Genome Biology

Fig. 4

From: TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches

Fig. 4

Validation of TrEMOLO frequency estimation. a Rationale of frequency estimation using fully mapped and clipped reads. b Violin plots of the INSIDER TE insertion frequencies estimated by TrEMOLO using the simulated datasets. Dashed lines represent the real frequency in the simulated datasets. c Violin plots of the OUTSIDER TE insertion frequency estimated by TrEMOLO in the simulated datasets with clipped reads. Dashed lines represent the real frequency in the simulated datasets

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