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Fig. 4 | Genome Biology

Fig. 4

From: The shaky foundations of simulating single-cell RNA sequencing data

Fig. 4

Comparison of clustering results across (experimental) reference and (synthetic) simulated data. a Boxplot of F1 scores across all type k references, simulation and clustering methods. b Boxplot of difference (\(\Delta\)) in F1 scores obtained from reference and simulated data. c Heatmap of clustering method (columns) rankings across datasets (rows), stratified by simulator (panels). d Heatmap of Spearman’s rank correlation (\(\rho\)) between F1 scores across datasets and clustering methods

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