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Fig. 2 | Genome Biology

Fig. 2

From: A pangenome analysis pipeline provides insights into functional gene identification in rice

Fig. 2

Feature of the rice pangenome constructed by PSVCP and distributions of PAVs in the other 11 rice genomes. a Feature of the rice pangenome. From outer-most track to innermost track: (a) New genes inserted in the Nipponbare reference (MSU7.0) from PAVs. The different colors indicate the origin of the PAVs; (b) Density of genes in the Nipponbare reference genome interrupted by PAVs; (c) Gene density; (d) PAV density; b PAV distributions of the 11 genomes. Genomes from outer-most track to innermost track: (a) CG14; (b) Basmati1; (c) N22; (d) FH838; (e) Tumba; (f) TM; (g) R498; (h) CN1; (i) LJ; (j) NamRoo; (k) Lemont

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