Skip to main content
Fig. 4 | Genome Biology

Fig. 4

From: SampleQC: robust multivariate, multi-cell type, multi-sample quality control for single-cell data

Fig. 4

Sample-to-sample distance embedding (UMAP). UMAP embedding, based on sample-sample similarities calculated with MMD, resulting in samples with similar QC metrics being plotted close to each other. A Sample group, i.e., clusters of samples with similar QC metrics distributions, as estimated by SampleQC. Remaining plots show sample metadata and statistical summaries: B Sequencing batch, C mitochondrial proportion (categorized), D number of cells (categorized), E median counts per cell, F median log2 splice ratio per cell

Back to article page