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Fig. 1 | Genome Biology

Fig. 1

From: Parallel single-cell and bulk transcriptome analyses reveal key features of the gastric tumor microenvironment

Fig. 1

Cellular landscape of EPCAM-negative cells in non-malignant and malignant gastric patient samples. A Study overview: matched malignant and non-malignant stomach samples were obtained from a total of 24 patients. Samples were processed in parallel as bulk specimen through RNA and exome-sequencing and single cells through droplet RNA sequencing after depleting of EPCAM-positive cells. B UMAP of 96,623 cells, color coded for major cell type. C Dotplot showing the scaled average expression together with the percentage of expression of marker genes per major cell type

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Genome Biology

ISSN: 1474-760X

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