Skip to main content
Fig. 5 | Genome Biology

Fig. 5

From: Comprehensive transcriptional variability analysis reveals gene networks regulating seed oil content of Brassica napus

Fig. 5

Predict the regulatory relationships affecting SOC TFs. a Enrichment of the Basenji model predicted key TF motifs in promoter sequences of TWAS significant genes of SOC. -log10 (FDR) represents the significant enrichment level. b Bar graph demonstrates the enrichment of the NAC motif in the promoter sequences of TWAS significant genes of SOC regulated by Hotspot87-88. -log10 (E-value) represents the significant enrichment level. c SOC phenotype of OE lines (BnaA07.NAC13, BnaC07.NAC13). Values are means (SD; n = 5 biological repeats). *P < 0.05 compared with WT and **P < 0.01 compared with WT in Student’s t test. d Representative confocal images of LDs (BODIPY 493/503 fluorescence, false color red) in tobacco leaves. The blue color shows chloroplast auto-fluorescence. Images were collected at the same magnification. Mock infection was infiltrated with media only; P19 was used as a viral suppressor of transgene silencing and was coexpressed in all BnaA09.SCL31 and BnaA07.NAC13 treatments. Bar = 20 μm. e–g Bar graph showing the relative LUC/REN ratio in the dual-luciferase assay. Values are means (SD; n = 3 biological repeats). BnaC03.SLP1(SHEWENELLA-LIKE PROTEIN PHOSPHATASE 1.h A model map predicting the regulatory mechanism of Hotspot87-88 in regulating SOC. The hexagonal shape shows the hotspot region, the circular shape represents the TFs, and the blue box inside represents the downstream TWAS significant genes of SOC

Back to article page