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Fig. 2 | Genome Biology

Fig. 2

From: Normalization and de-noising of single-cell Hi-C data with BandNorm and scVI-3D

Fig. 2

Comparison of scHi-C normalization and de-noising methods for their performances in separating cells from major cell lines. Application of the scHi-C data normalization and de-noising methods on Ramani2017 (a) with 4 cell types and 2610 cells and Kim2020 (b) data sets with 5 cell types and 9230 cells. The results are displayed using scatter plots of the first two UMAP coordinates. The colors of the plotting symbols depict the cell types

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