BindVAE: Dirichlet variational autoencoders for de novo motif discovery from accessible chromatin

Table 1 Statistics of ChIP-seq data used to plot Figure 4c showing the number of overlapping peaks

TF-name	Peaks overlapping with ATAC-seq data	Peaks from column 1 that are mapped to TF by Bind-VAE	Precision	Recall
TCF3	9703	5107	0.17	0.53
MAFK	782	436	0.15	0.56
ELK1	4484	3773	0.15	0.84
NRF1	4322	3874	0.21	0.90
RFX5	3226	1506	0.11	0.47
NR2C2	410	158	0.15	0.39
TBX21	14820	5865	0.25	0.40
POU2F2	14972	4593	0.16	0.31
SPI1	16177	10496	0.33	0.65
RUNX3	33873	25403	0.51	0.75
MAX	9110	6793	0.21	0.75
ETS1	7285	5373	0.28	0.74

ISSN: 1474-760X