Fig. 3
From: scSTEM: clustering pseudotime ordered single-cell data
scSTEM results for mouse embryonic blood cells and comparison for different trajectory inference methods and different gene summarization methods. A UMAP visualization of mouse embryonic blood cell data set. B scSTEM results for path 1, with top 10 enriched GO term (ranked by enrichment fold). C scSTEM results and the top 10 enriched GO terms for different trajectory inference methods and different gene summarization methods. Black curves indicate the trajectory tree, and the highlighted red curves are edges along one selected path. Yellow cells are cells mapped to the selected path and grey cells are other remaining cells