Fig. 6
From: RATTLE: reference-free reconstruction and quantification of transcriptomes from Nanopore sequencing
a Maximum memory usage in Gigabytes (y axis) as a function of the number of input reads (x axis) for RATTLE clustering (red) and read correction (blue) steps. b Sum of the CPU time in seconds (y axis) for the RATTLE clustering, correction, and polishing steps for an increasing number of input reads (x-axis). RATTLE time (red) is compared with the linear (green) and quadratic (blue) times. The O(n) and O(n.2) graphs are extrapolated from the first value. For a and b, RATTLE was run with the parameter configuration c5 described in (Additional file 2: Table S11). Memory and timing values are given in Additional file 2: Table S12