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Fig. 3 | Genome Biology

Fig. 3

From: scDART: integrating unmatched scRNA-seq and scATAC-seq data and learning cross-modality relationship simultaneously

Fig. 3

The results of scDART and baseline methods on the mouse endothelial cell development dataset. a–c Latent embedding of scDART, visualized using PCA. Cells are colored with (a) cell type annotation from original data paper, (b) data batches, and (c) inferred pseudotime. Red lines in (a) show the inferred trajectory backbone. d The latent embedding of Seurat, Liger, and UnionCom where cells are colored with cell type annotation from original data paper. All plots share the same legend as in the Liger plot. e The latent embedding of Seurat, Liger, and UnionCom where cells are colored with data batches. All plots share the same legend as in the Liger plot

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Genome Biology

ISSN: 1474-760X

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