Fig. 6
From: Comprehensive assessment of differential ChIP-seq tools guides optimal algorithm selection
Chromosome characteristics and signal distribution influence AUPRC. Combined AUPRCs from simulated and sub-sampled data of the top 11 DCS tools (based on AUPRC of the initial six shape and regulation scenarios) for five chromosomes of mm10 (chr1, chr8, chr11, chr19, and chrX) for TFs, sharp, and broad marks are shown. Chromosomes per DCS tool are ordered by length, from short to long. Top panel, TFs; middle panel, sharp marks; bottom panel, broad marks. Box plot limits, 25% and 75% quantiles; center line, median; whiskers, 1.5× interquartile range