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Fig. 3 | Genome Biology

Fig. 3

From: PEGR: a flexible management platform for reproducible epigenomic and genomic research

Fig. 3

Protocol management system. A Browser shot of PEGR “Protocols” interface. Default view displays protocols that have been approved by an administrator. Personal (nonapproved) protocols are available under “My Protocols”. B Browser shot of PEGR webform to create a new protocol. PEGR inventory database autocompletes fields where possible in Shared Item Types (input) and End Product Type (output) fields. C A CSV webform to upload protocols in bulk to the PEGR “Protocol” interface. A template guide appears to assist upload. D Traced samples are defined in a “Lab Protocol” and represent a sample that undergoes changes to its state (e.g., cell pellet into purified DNA). E “ProtocolGroup” is accessible through the Admin console and provides a webform and CSV option for defining new ProtocolGroups based on approved protocols

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