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Fig. 3 | Genome Biology

Fig. 3

From: DeepRepeat: direct quantification of short tandem repeats on signal data from nanopore sequencing

Fig. 3

Benchmarking repeat quantification on CHM13. a Estimated telomeric repeat counts against benchmark repeat counts determined on CHM13 v1.1 assembly (Pearson correlation = 0.83). bd Quantification of 439 long STR regions in CHM13 using DeepRepeat (b), RepeatHMM (c), and STRique (d). The distribution of absolute difference between estimated repeat counts and the truth set (CHM13 v1.1 assembly) is shown

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