Fig. 1
From: DeepRepeat: direct quantification of short tandem repeats on signal data from nanopore sequencing
DeepRepeat workflow: converting nanopore signals to images for deep learning prediction. Each dot in the curve in black represents an event in nanopore data and is represented by a column in a channel. R: the size of repeat motif, for example, R = 3 for trinucleotide repeats. Del: deletion indicating 1 bp deletion compared against the repeat motif of interest; Ins: insertion indicating 1 bp insertion compared against the repeat motif of interest. In the bottom and the left, an ideal image representation of repeat regions is white dots, while the image representation of non-repeat regions is dispersed red or blue or green or their mixture. Each basecalled nucleotide in the sequence of the bottom subfigure is for a column for demonstration purpose