Fig. 3
From: One Cell At a Time (OCAT): a unified framework to integrate and analyze single-cell RNA-seq data
OCAT on individual scRNA-seq datasets. A UMAP projection of the OCAT sparsified embeddings for Romanov, Zeisel, Retina, PBMC 68k datasets, colored by the annotated cell types. B Differential gene expression analysis with OCAT on the Zeisel dataset. C OCAT trajectory inference and pseudotime inference on the HSMM dataset. D OCAT cell type inference performance on individual datasets Romanov, Zeisel, Retina, and PBMC, evaluated by three classification metrics, precision, recall, and F1