Table 5 Predicted repeat content of the Pt76 and Pgt chromosomes. The Pt76 chromosomes are larger in size and this is driven by repeat expansion, particularly of retroelements and unclassified repeats
| Â | Pt HiFi chromosomes | Pgt chromosomes |
|---|---|---|
Number of scaffolds | 36 | 36 |
Total length | 244.8 Mb | 169.9 Mb |
GC content | 46.6% | 43.5% |
Bases masked | 62.1% | 44.4% |
Retroelements (% of sequence) | 18.9% | 12.9% |
Ty1/Copia (% of sequence) | 5.9% | 3.1% |
Gypsy/DIRS1 (% of sequence) | 11.0% | 8.6% |
DNA transposons (% of sequence) | 6.4% | 5.5% |
Unclassified (% of sequence) | 35.2% | 24.5% |