Fig. 3

The active transcription landscape of the B. natans nuclear and nucleomorph genomes as measured by KAS-seq. A KAS-seq and ATAC-seq profiles at a typical nuclear locus. B KAS-seq profiles over the top 10,000 (by KAS signal) nuclear genes. C KAS-seq profiles over the NM1, NM2, and NM3 nucleomorph chromosomes. D Average KAS-seq profile over nuclear gene TSSs. E Average KAS-seq profile over nucleomorph TSSs. F Relative enrichment of KAS-seq signal in the different B. natans genomic compartments. Shown is the ratio of normalized mapped KAS-seq peaks for each of the compartments relative to the normalized mapped reads in an input sample (a Hi-C dataset mapped in a single-end format)